rs13361707 chr5:40791782 C>T
- Sequence
gcattccaaatacccatgagccac[C/T]atcagcttaagcaataaaacatta
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- FEZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FEZF1_HUMAN | n/a | 2.35 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP college completion, crohns disease, combined control dataset, diastolic blood pressure (dbp), irritible bowel syndrome, major depressive disorder, major depressive disorder (females), non-cardia gastric cancer, non-cardia gastric cancer (female), non-cardia gastric cancer (in <60 years old), non-cardia gastric cancer (in =60 years old), non-cardia gastric cancer (in drinkers), non-cardia gastric cancer (in non-drinkers), non-cardia gastric cancer (in non-smokers), non-cardia gastric cancer (in smokers), non-cardia gastric cancer (male), non-cardia gastric cancer vs cardia gastric cancer, ptger4 gene expression in lymphoblastoid cell lines, recurrent early onset major depressive disorder, rheumatoid arthritis, triglycerides
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Esophagus_Mucosa, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach