rs1340236 chr1:206949331 C>T
- Sequence
gagtcaaaaatcctacgtcctatt[C/T]tgggctcagccacacgccggtggt
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN MEF2B_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | n/a | 1.81 | 1.33 | n/a | No Hit | |||
| MEF2B_HUMAN | n/a | 2.02 | 1.33 | 3.83 | Concordant | |||
| IKZF2_HUMAN | -0.45 | 1.56 | 1.33 | n/a | n/a |
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Motif analysis
