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rs1340978 chr1:161707180 A>G

Sequence
agatgcaaggagatgagacagtta[A/G]atttacttcctcttttctaatctg
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 1.03 -0.31 1.9·10-231.00 2.22
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Colon_Sigmoid Colon_Transverse Esophagus_Muscularis Liver Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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