Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs13414407 chr2:233404512 A>G

Sequence
acctgccctgagagttgagaagac[A/G]aaacttcctcctgctttgggtgat
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
SMC3_HUMAN RAD21_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC3_HUMAN 1.24 -0.52 2.6·10-51.00 2.00 n/a n/a
RAD21_HUMAN 1.19 -0.55 2.9·10-51.00 1.95 n/a n/a
CTCF_HUMAN 0.79 0.47 0.010.36 1.50 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Testis

Download