rs13426105 chr2:12108274 C>T
- Sequence
catcaagaaagcagcctcctgtct[C/T]gtgttctcttcctaacatagcatc
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.28 | 1.18 | 1.70 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), fasting insulin, homa-ir, ldl cholesterol, triglycerides, urinary albumin-to-creatinine ratio