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rs134596 chr22:29074127 A>G

Sequence
ggctgcacccgcttggcggacatt[A/G]taacttctgcctcgcgaggaacgg
ASB in cell types
foreskin keratinocyte HEK293 (embryonic kidney)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.43 1.52 1.000.02 1.51 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol infant head circumference ldl cholesterol neuroticism schizophrenia simpson-angus scale total cholesterol transmission distortion urinary albumin-to-creatinine ratio waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Hypothalamus Breast_Mammary_Tissue Colon_Sigmoid Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Ovary Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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