rs1346441 chr5:135194426 A>G
- Sequence
agttcagccctgcttttcttctct[A/G]cctgatctcagcatagacagctga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | 1.79 | -0.44 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, comorbid depressive syndrome and alcohol dependence, hip bone mineral density (bmd), maternal transmission distortion, tetrology of fallot, transmission distortion, variant creutzfeldt-jakob disease, waist hip ratio