rs1351227 chr12:13234051 T>A
- Sequence
agtagtaacaacattaatgcaatt[T/A]tccatcgtctctggcccgtttcct
- ASB in cell types
- foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.62 | 0.35 | 1.27 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, barnes akathisia rating scale, bipolar disorder, childhood acute lymphoblastic leukemia, major depressive disorder, response to anti-tumor necrosis factor treatment of rheumatoid arthritis, simpson-angus scale