rs13624 chr12:124914621 T>C
- Sequence
tcacagcgatccacaaacaagaac[T/C]gcgacccaaatcccggctgcgacg
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) GM12878 (female B-cells) HEK293T (embryonic kidney)
- ASB for transcription factors
- FOXK2_HUMAN ZBT11_HUMAN SPI1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 0.84 | 2.93 | 1.56 | n/a | n/a | |||
| ZBT11_HUMAN | -2.02 | 2.08 | 2.00 | n/a | n/a | |||
| SPI1_HUMAN | -1.86 | 1.78 | 2.50 | -2.35 | Discordant | |||
| CTCF_HUMAN | 0.41 | 0.66 | 1.23 | n/a | No Hit |
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Motif analysis
