rs1364392 chr2:221943348 A>T
- Sequence
gttccaggaagtctgccagccaca[A/T]ttctgagccttctgcagggtagga
- ASB in cell types
- LHSAR (prostate epithelial cells) tibial nerve PC3 (prostate carcinoma) esophagus muscularis mucosa
- ASB for transcription factors
- ANDR_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.34 | 2.50 | 1.75 | n/a | No Hit | |||
| EP300_HUMAN | -1.52 | 2.28 | 1.42 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial