rs1364648 chr2:1751160 C>T
- Sequence
gttatccgcccccagtcttgtgat[C/T]tgtcccacagcaaacactccttcc
- ASB in cell types
- HEK293 (embryonic kidney) VCaP (prostate carcinoma)
- ASB for transcription factors
- ZBT20_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT20_HUMAN | 3.08 | n/a | 1.33 | n/a | n/a | |||
| ANDR_HUMAN | 0.79 | -0.19 | 1.89 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, biploar disorder (bipolar schizoaffective disorder), bipolar disorder, height, ldl cholesterol, ldl cholesterol change with statins, major depressive disorder, salmonella-induced pyroptosis, systolic blood pressure (sbp), tardive dyskinesia, total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Nerve_Tibial