rs13757 chr1:205632071 G>A
- Sequence
accctaaggggtgtcgtgagccgc[G/A]tctgccagcaaacccgggtttggt
- ASB in cell types
- HEK293 (embryonic kidney) A549 (lung carcinoma) CD14+ monocytes fetal bone marrow-derived mononuclear cells
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN STAT1_HUMAN JUN_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.35 | 0.02 | 2.03 | n/a | n/a | |||
| RAD21_HUMAN | 1.10 | 0.29 | 1.80 | n/a | n/a | |||
| STAT1_HUMAN | 1.14 | n/a | 2.50 | n/a | No Hit | |||
| JUN_HUMAN | 0.80 | -0.13 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.94 | n/a | 3.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Prostate, Spleen, Testis, Thyroid