rs138589728 chr14:104650558 C>G
- Sequence
gacactgaagcgggcgccccctgg[C/G]cgagcggggcgcaggggaagaggg
- ASB in cell types
- HUES64 (embryonic stem cells) HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SRF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.78 | 0.00 | 1.15 | -3.14 | Concordant | |||
| SRF_HUMAN | 1.29 | -0.43 | 1.33 | n/a | No Hit |
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Motif analysis
