rs138733 chr22:35301619 G>C
- Sequence
gatgagacatattttccattctta[G/C]tgtcttgcgaaacctcacgaaagc
- ASB in cell types
- CD14+ monocytes Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -2.17 | 2.36 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, fasting blood glucose, fasting insulin, homa-ir, ldl cholesterol, total cholesterol, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Coronary, Artery_Tibial, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood