rs138883747 chr2:128091192 C>A
- Sequence
ctgcaggaagcggaagtaaaaggg[C/A]ggccggcagctgggcaattgcttt
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma)
- ASB for transcription factors
- GABPA_HUMAN JUN_HUMAN BCL3_HUMAN RFOX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | -1.07 | 2.22 | 2.00 | n/a | No Hit | |||
| JUN_HUMAN | 0.46 | 1.39 | 2.18 | n/a | No Hit | |||
| BCL3_HUMAN | 0.14 | 0.80 | 1.79 | n/a | n/a | |||
| RFOX2_HUMAN | n/a | 2.41 | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | -0.62 | 1.53 | 1.83 | n/a | No Hit |
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