ADASTRA v1.6.10
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rs1391221
chr11:86244237
G
>
C
Sequence
gcactttggctgtaactcattgga[G/C]tctagtctcataatgttaggatat
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
HeLa S3 (cervical adenocarcinoma)
GM12878 (female B-cells)
HEK293 (embryonic kidney)
ASB for transcription factors
SRBP2_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN
n/a
1.96
1.00
0.04
1.33
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
height
,
mitral annular calcium
,
total cholesterol
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Artery_Tibial
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Heart_Left_Ventricle
,
Liver
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)