rs1392295 chr3:46059612 T>A
- Sequence
aaaactttcactcttacttctata[T/A]aacatgcagtatacgtattccatt
- ASB in cell types
- monocyte-derived macrophages CD14+ monocytes periferal blood macrophages
- ASB for transcription factors
- SPI1_HUMAN STAT1_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.30 | 1.91 | 1.95 | n/a | No Hit | |||
| STAT1_HUMAN | -3.45 | 2.33 | 2.50 | n/a | No Hit | |||
| BHE40_HUMAN | -1.53 | 1.34 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood