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rs139403 chr22:39151016 G>A

Sequence
aatgccagctccctgagggaaggg[G/A]tggatccctggggcttagactggt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN 2.37 0.84 7.0·10-40.35 1.17 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cerebellum Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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