rs139650 chr22:24837683 T>C
- Sequence
cctggtaacgggcgtcttcccaga[T/C]gctggcatcactgctagaccaagg
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) gastroesophageal sphincter 22RV1 (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.14 | -1.32 | 2.06 | n/a | No Hit |
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