rs140157917 chr7:105593719 C>T
- Sequence
tttcaccgtgttagccaggatggt[C/T]tcgatctcctgacctcgtgatccg
- ASB in cell types
- GM12878 (female B-cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- RAD51_HUMAN IKZF1_HUMAN MTA2_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD51_HUMAN | -3.53 | 2.89 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | -2.66 | 2.24 | 1.33 | n/a | No Hit | |||
| MTA2_HUMAN | -1.96 | 2.11 | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | -1.79 | 2.02 | 1.33 | n/a | n/a | |||
| ELF1_HUMAN | -1.85 | 1.67 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Skin_Sun_Exposed_Lower_leg, Thyroid