rs140245261 chr19:1374497 A>G
- Sequence
ctcttgttcttttagagttgcacc[A/G]tgagcctctctgcactcttcccaa
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- RARA_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 2.09 | -2.82 | 1.50 | n/a | No Hit | |||
| CEBPA_HUMAN | 1.75 | -1.54 | 1.50 | -4.28 | Concordant |
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Motif analysis
