rs1406257 chr2:180656618 A>G
- Sequence
ggagctagtgctaatgtcaaatcc[A/G]tgagtcaggtgtagttgctatgag
- ASB in cell types
- coronary artery smooth muscle MCF7 (Invasive ductal breast carcinoma) HCT-116 (colon carcinoma)
- ASB for transcription factors
- JUND_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUND_HUMAN | 0.78 | -0.06 | 1.33 | 0.00 | Weak Discordant | |||
| JUN_HUMAN | 0.66 | n/a | 1.33 | -0.64 | Weak Concordant |
Items per page:
1 – 2 of 2
Motif analysis
