rs1409751 chr10:14197066 C>G
- Sequence
cagcctgaagacccagaaacatcc[C/G]gatggatatttaagccagctcaga
- ASB in cell types
- A549 (lung carcinoma) K562 (myelogenous leukemia) GM12878 (female B-cells) H1 (embryonic stem cells)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.91 | -0.16 | 1.85 | n/a | n/a | |||
| RAD21_HUMAN | 0.56 | 0.07 | 1.63 | n/a | n/a |
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