rs14132 chr12:19521247 G>C
- Sequence
tttaatatgacaatgttgatcttg[G/C]taataagccagtacattaaatttt
- ASB in cell types
- LNCaP (prostate carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- FOXA1_HUMAN PRDM6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.83 | -1.59 | 1.42 | -0.42 | Weak Concordant | |||
| PRDM6_HUMAN | 2.00 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
