rs141374540 chr17:38416429 G>A
- Sequence
ctcctggcctcaggtgatccgcta[G/A]cctcggcctcccaaagtgctggga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HTF4_HUMAN HDAC2_HUMAN MTG16_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | -0.40 | 2.30 | 2.00 | n/a | No Hit | |||
| HDAC2_HUMAN | -2.73 | 2.08 | 2.00 | n/a | n/a | |||
| MTG16_HUMAN | n/a | 2.16 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -0.97 | 1.50 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | -2.23 | 1.89 | 2.00 | n/a | n/a |
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