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rs1416931 chr10:85146139 G>A

Sequence
agtgcatgccagggagaggacgtc[G/A]tatgtgtgcaagccctgagagagg
ASB in cell types
liver
ASB for transcription factors
SP1_HUMAN RXRA_HUMAN RAD21_HUMAN HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP1_HUMAN -0.91 2.32 1.003.1·10-4 1.33 n/a No Hit
RXRA_HUMAN -1.05 1.70 1.002.2·10-3 1.33 n/a No Hit
RAD21_HUMAN -1.29 1.61 1.003.2·10-3 1.33 n/a n/a
HNF4A_HUMAN -0.59 1.36 1.006.3·10-3 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol refractive error salmonella-induced pyroptosis total cholesterol

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