rs141709789 chr6:3835139 C>T
- Sequence
gtgaagtgtccagcaggtgacagt[C/T]ctgttgtgttagggcagggtggaa
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.09 | -0.75 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.89 | -0.43 | 2.00 | -2.27 | Concordant |
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Motif analysis
