rs142646229 chr2:5691830 C>G
- Sequence
accgggcgggctcggggcggcgac[C/G]cgggggagcggccgagccccgcga
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.96 | 2.48 | 1.48 | -1.75 | Weak Discordant |
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Motif analysis
