ADASTRA v1.6.10
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rs1429163
chr3:16509780
G
>
A
Sequence
acccagatgggtatcacgagtcac[G/A]aaatcactcagccaatgtttactg
ASB in cell types
MDA-MB-453 (breast adenocarcinoma)
ASB for transcription factors
FOXA1_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
2.24
-2.54
3.5·10
-4
1.00
1.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
college completion
,
microalbuminuria
,
years of education
GTEx eQTL
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)