rs142924580 chr6:1268550 G>A
- Sequence
ggaatgtctttcatctctgtatcc[G/A]cagtctgacgcctggtgctataga
- ASB in cell types
- HepG2 (hepatoblastoma) lower leg skin
- ASB for transcription factors
- ETV5_HUMAN CTCF_HUMAN RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETV5_HUMAN | 2.51 | n/a | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 2.18 | -3.14 | 2.00 | n/a | No Hit | |||
| RFX1_HUMAN | 1.90 | n/a | 2.00 | n/a | No Hit |
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