rs1464042 chr12:52697542 T>C
- Sequence
cccgggttgccacatacaaaacag[T/C]gcctcctgcagttgtgcagtgcag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.79 | 1.23 | 1.85 | 0.37 | Weak Concordant |
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Motif analysis
