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rs149249 chr7:74173331 T>C

Sequence
actccagaggctaaggcggcagga[T/C]ggcatgagcccaagaggtcaaggc
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells)
ASB for transcription factors
ATF3_HUMAN COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF3_HUMAN -1.55 1.79 1.000.03 1.33 n/a No Hit
COT1_HUMAN 0.40 1.79 1.000.03 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight prop taste detection threshold refractive error
GTEx eQTL Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Lung Muscle_Skeletal Whole_Blood

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