rs149753275 chr17:8060400 C>T
- Sequence
tcagaaaaaattcgctagatggcg[C/T]atattgaccgacttatgagcggtt
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.88 | -0.29 | 3.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.58 | -0.37 | 2.97 | -2.17 | Concordant |
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Motif analysis
