ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs149845
chr13:50378654
C
>
T
Sequence
tagctagggccaaccacctgtggc[C/T]ctagtcaacgatcaaagatagtta
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
PRDM6_HUMAN
SP7_HUMAN
ZNF2_HUMAN
ZN610_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM6_HUMAN
n/a
0.88
1.00
1.2·10
-3
2.00
n/a
No Hit
SP7_HUMAN
n/a
2.89
1.00
2.2·10
-3
2.50
n/a
n/a
ZNF2_HUMAN
-2.26
2.33
1.00
0.03
2.00
n/a
n/a
ZN610_HUMAN
-1.97
2.32
1.00
0.05
2.00
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP
prop taste detection threshold
GTEx eQTL
Lung
,
Pituitary
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)