ADASTRA v1.6.10
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rs150392
chr5:103475789
T
>
C
Sequence
acaggaattttatgattcaaacga[T/C]ccatggtctctgaaaataatcatg
ASB in cell types
foreskin keratinocyte
K562 (myelogenous leukemia)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
0.45
n/a
4.2·10
-4
1.00
2.50
K562 (myelogenous leukemia)
-0.27
0.57
1.00
8.1·10
-4
1.98
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5
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Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
ldl cholesterol
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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