rs150509 chr17:34412623 T>C
- Sequence
aaaaataaataccaaaaggaaagc[T/C]acggcatccgttacgtctgtctca
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma) CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- MTG16_HUMAN GATA1_HUMAN FOXA1_HUMAN HXB13_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | 2.42 | -3.38 | 2.00 | n/a | n/a | |||
| GATA1_HUMAN | 1.51 | -1.25 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.04 | 1.31 | 1.68 | n/a | No Hit | |||
| HXB13_HUMAN | -1.57 | 1.54 | 2.00 | n/a | No Hit | |||
| TAL1_HUMAN | 2.08 | -0.13 | 1.83 | n/a | No Hit |
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