rs150818419 chr12:122100178 T>C
- Sequence
atctacagggttagttattcagac[T/C]gacttgggaagcacctctgtggta
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.67 | -0.10 | 2.01 | |||
| HEK293 (embryonic kidney) | -0.20 | 0.73 | 2.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Muscle_Skeletal, Small_Intestine_Terminal_Ileum, Testis