rs151345 chr20:59011794 G>C
- Sequence
attccaggaactgagggttccccc[G/C]ctttgtagaccatacagggtaact
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- E4F1_HUMAN VEZF1_HUMAN PKNX1_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| E4F1_HUMAN | n/a | 2.45 | 2.00 | n/a | n/a | |||
| VEZF1_HUMAN | -3.32 | 2.32 | 2.00 | n/a | No Hit | |||
| PKNX1_HUMAN | -2.83 | 2.24 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -0.83 | 1.75 | 2.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood