rs153742 chr5:116462805 C>T
- Sequence
gactccttcaattgctacagtaca[C/T]agtcacctaaactttggtcattca
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.67 | -0.04 | 1.43 | -1.05 | Weak Concordant |
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Motif analysis
