ADASTRA v1.6.10
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rs153878
chr5:123835322
T
>
C
Sequence
atttatcaacacaccattgggtct[T/C]agactctttgctgatagaaatcag
ASB in cell types
GM12878 (female B-cells)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells)
0.38
1.04
0.32
0.02
1.28
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5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
serum creatinine
,
years of education
GTEx eQTL
Esophagus_Mucosa
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale