rs1539339 chr9:112831449 A>C
- Sequence
tactgggtgaggccagtctgacca[A/C]caatgggcatggaacagaaggaac
- ASB in cell types
- tibial nerve VCaP (prostate carcinoma) monocyte-derived macrophages
- ASB for transcription factors
- EP300_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 1.64 | -0.71 | 1.54 | n/a | n/a | |||
| SPI1_HUMAN | 1.39 | -1.02 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, body mass index (bmi), comorbid depressive syndrome and alcohol dependence, triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Muscle_Skeletal, Testis, Thyroid