ADASTRA v1.6.10
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rs154268
chr5:40795766
C
>
T
Sequence
ctgatcaacatcaacaaatgtgat[C/T]atgaacaaatttaaccatatctat
ASB in cell types
K562 (myelogenous leukemia)
HEK293 (embryonic kidney)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.35
0.49
0.02
5.5·10
-4
1.37
HEK293 (embryonic kidney)
-0.68
0.52
1.00
0.04
2.75
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
total cholesterol change with statins
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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