rs1545723 chr18:44791105 A>G
- Sequence
gacaatggactagagctactttgc[A/G]taagaggtgcgctgaaggcaggat
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- RARA_HUMAN CEBPA_HUMAN HLF_HUMAN SMAD4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | -3.36 | 2.51 | 1.50 | n/a | No Hit | |||
| CEBPA_HUMAN | n/a | 2.02 | 1.50 | n/a | No Hit | |||
| HLF_HUMAN | -2.71 | 2.13 | 1.50 | 2.84 | Concordant | |||
| SMAD4_HUMAN | -2.59 | 2.00 | 1.50 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP obesity with early age of onset (age >2), parkinsons disease, paternal transmission distortion, transmission distortion, years of education