rs1548936 chr2:169190512 C>T
- Sequence
atcgtacaccacactggactccaa[C/T]ggtacattagcgcctgttgatgag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KDM1A_HUMAN MTG8R_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | 1.84 | -0.14 | 1.33 | n/a | n/a | |||
| MTG8R_HUMAN | 1.20 | -1.07 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol change with statins, irritible bowel syndrome, ldl cholesterol change with statins, maternal transmission distortion, schizophrenia, serum creatinine, total cholesterol change with statins