rs1550097 chr2:232563565 C>T
- Sequence
ctagctaagaagagggccttaaac[C/T]ctagctatgagaagctaagtcctg
- ASB for transcription factors
- GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | 2.27 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP age at death with kuru exposure, height, ldl cholesterol, myopia, refractive error, rheumatoid arthritis, schizophrenia
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Colon_Transverse, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Stomach