rs1551399 chr8:125527723 A>C
- Sequence
tccctttctcatctgaaaaaaaaa[A/C]atggggttgatgtgatgatgaaaa
- ASB in cell types
- Th1-cells monocyte-derived macrophages
- ASB for transcription factors
- TBX21_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | 1.27 | -1.57 | 1.33 | n/a | No Hit | |||
| SPI1_HUMAN | -1.70 | 1.62 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
EMBL-EBI chronic inflammatory diseases (ankylosing spondylitis, crohns disease, psoriasis, primary sclerosing cholangitis, ulcerative colitis) (pleiotropy)
GRASP chronic kidney disease, fasting insulin, homa-ir, parkinsons disease, serum creatinine, total cholesterol, triglycerides, triglycerides change with statins