rs1552270 chr16:85297581 C>A
- Sequence
tggtgtgatcatggctcactgcag[C/A]ctccacctctcaggctcatgtgat
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) H929 (plasma cell myeloma)
- ASB for transcription factors
- PBX2_HUMAN ATF3_HUMAN MEIS2_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PBX2_HUMAN | n/a | 2.94 | 2.50 | n/a | No Hit | |||
| ATF3_HUMAN | n/a | 2.18 | 2.50 | n/a | No Hit | |||
| MEIS2_HUMAN | n/a | 2.37 | 2.50 | n/a | No Hit | |||
| PKNX1_HUMAN | 1.48 | 3.05 | 2.00 | n/a | No Hit |
Items per page:
1 – 4 of 4