ADASTRA v1.6.10
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rs156660
chr5:115885548
T
>
C
Sequence
caagcaaggttatttaaccttctt[T/C]tgcctgctttgttctagccacgct
ASB in cell types
liver
ASB for transcription factors
HNF4A_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN
1.74
-1.53
0.02
1.00
1.33
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
height
,
ldl cholesterol
,
microalbuminuria
GTEx eQTL
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Stomach
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)