rs157604 chr5:56496818 T>C
- Sequence
ctgtttattctccctcaattgtgc[T/C]atctcctgcatctcactaatgagc
- ASB in cell types
- SK-N-SH (neuroblastoma) SK-N-BE2 (neuroblastoma)
- ASB for transcription factors
- GATA3_HUMAN HTF4_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | 1.76 | -1.37 | 1.33 | n/a | No Hit | |||
| HTF4_HUMAN | 2.14 | -0.31 | 1.33 | n/a | No Hit | |||
| TEAD4_HUMAN | 2.01 | -2.63 | 1.50 | n/a | No Hit |
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