ADASTRA v1.6.10
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rs157916
chr7:130884634
G
>
A
Sequence
ctggtgctctgtgcgggagaaaac[G/A]tgaggtgtggccgttgctaaggaa
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
RFX1_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX1_HUMAN
-1.44
1.29
1.00
0.01
1.92
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
parkinsons disease
,
suicide attempts in bipolar disorder (females)
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Hypothalamus
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Esophagus_Muscularis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)